Search_Gene

Query Gene
Gene name: Example: BCL2L11, ERCC1

Symbol:

LIG4

Description:

ligase IV, DNA, ATP-dependent [Source:HGNC Symbol;Acc:6601]

Location:

Chr13:108859794-108870716[-]

CRmiRSNP:

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Records:null

Compound	CRmiRSNP	SNP_sig	Model	Molecule	Mol_sig	Type

Model : M1-Allele, M2-Recessive, M3-Additive, M4-Dominant
Total:0 Current:1 [First] [Prev] [Next] [Last]

Compound:

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Records:169

Gene	Compound	Gen_sig	Exp_pattern
LIG4	CAP 1 hydrochloride	0.041	Down
LIG4	Pap H	0.047	Up
LIG4	11H-Indeno[1,2-c]isoquinolinium, 9-hydroxy-2,3,8-trimethoxy-6-methyl-, chloride	0.001	Down
LIG4	CI-941	0.024	Down
LIG4	Indeno[1,2-c]isoquinoline-5,11-dione, 6-methyl- 5-(methylsulfonyloxy)-5,6,6a,11a-tetrahydro- 2,3,8-trimethoxy-, cis-	0.034	Down
LIG4	NSC 404886	0.03	Down
LIG4	NSC 405789	0.004	Down
LIG4	NSC 49713	0.018	Down
LIG4	NSC 50567	0.006	Up
LIG4	C.I. 37559	0.02	Down
LIG4	NSC 527353	0.006	Up
LIG4	NSC 58903	0.028	Down
LIG4	9-AC	0.018	Down
LIG4	Camptothecin ethylglycinate ester hydrochloride	0.012	Down
LIG4	Camptothecin hemisuccinate sodium salt	0.008	Down

Expression pattern: Sensitivity / Resistance
Total:12 Current:2 First Prev Next Last

SNP:

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Records:56

SNP	Gene	SNP_location	SNP_allele
rs113388531	LIG4	Chr13:108859800	G/A
rs113388531	LIG4	ChrLRG_79:108859800	G/A
rs10131	LIG4	Chr13:108859846	C/T
rs10131	LIG4	ChrLRG_79:108859846	C/T
rs75642465	LIG4	Chr13:108859898	C/T
rs75642465	LIG4	ChrLRG_79:108859898	C/T
rs146506306	LIG4	Chr13:108860025	-/AAAA
rs146506306	LIG4	ChrLRG_79:108860025	-/AAAA
rs116018061	LIG4	Chr13:108860055	T/A
rs116018061	LIG4	ChrLRG_79:108860055	T/A
rs201529988	LIG4	Chr13:108860145	G/C
rs201529988	LIG4	ChrLRG_79:108860145	G/C
rs79925936	LIG4	Chr13:108860180	G/A
rs79925936	LIG4	ChrLRG_79:108860180	G/A
rs78960349	LIG4	Chr13:108860181	C/A

Total:4 Current:1 [First] [Prev] Next Last

miRNA:

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Records:33

Gene	Gen_transcript	miRNA	miR_location
LIG4	ENST00000310534	hsa-mir-144-5p	Chr17:27188601-27188622[-]
LIG4	ENST00000310534	hsa-mir-155-5p	Chr21:26946295-26946317[+]
LIG4	ENST00000310534	hsa-mir-181a-3p	Chr1:198828198-198828219[-]
LIG4	ENST00000356922	hsa-mir-181a-3p	Chr1:198828198-198828219[-]
LIG4	ENST00000310534	hsa-mir-181c-3p	Chr19:13985577-13985598[+]
LIG4	ENST00000356922	hsa-mir-181c-3p	Chr19:13985577-13985598[+]
LIG4	ENST00000310534	hsa-mir-19a-5p	Chr13:92003158-92003179[+]
LIG4	ENST00000310534	hsa-mir-19b-3p	Chr13:92003499-92003521[+]
LIG4	ENST00000356922	hsa-mir-19b-3p	Chr13:92003499-92003521[+]
LIG4	ENST00000310534	hsa-mir-19b-3p	ChrX:133303713-133303735[-]
LIG4	ENST00000356922	hsa-mir-19b-3p	ChrX:133303713-133303735[-]
LIG4	ENST00000310534	hsa-mir-26a-5p	Chr12:58218441-58218462[-]
LIG4	ENST00000310534	hsa-mir-26a-5p	Chr3:38010904-38010925[+]
LIG4	ENST00000310534	hsa-mir-369-5p	Chr14:101531943-101531964[+]
LIG4	ENST00000356922	hsa-mir-369-5p	Chr14:101531943-101531964[+]

Total:3 Current:1 [First] [Prev] Next Last