Search_Gene

Query Gene
Gene name: Example: BCL2L11, ERCC1

Symbol:

HPS1

Description:

Hermansky-Pudlak syndrome 1 [Source:HGNC Symbol;Acc:5163]

Location:

Chr10:100175955-100206684[-]

CRmiRSNP:

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Records:54

Compound	CRmiRSNP	SNP_sig	Model	Molecule	Mol_sig	Type
NSC 74502	rs701801	0.01747388	M2	HPS1	0.041	Target_3'utr
NSC 108165	rs701801	0.03294677	M2	HPS1	0.027	Target_3'utr
NSC 127328	rs701801	0.004328045	M2	HPS1	0.025	Target_3'utr
NSC 156274	rs701801	0.0003663	M2	HPS1	0.026	Target_3'utr
NSC 175296	rs701801	2.24E-05	M2	HPS1	0.048	Target_3'utr
NSC 267461	rs701801	0.004466859	M2	HPS1	0.037	Target_3'utr
NSC 323241	rs701801	1.61E-05	M2	HPS1	0.023	Target_3'utr
NSC 376265	rs701801	1.05E-05	M2	HPS1	0.047	Target_3'utr
NSC 617989	rs701801	0.000196112	M2	HPS1	0.042	Target_3'utr
NSC 622281	rs701801	5.07E-05	M2	HPS1	0.02	Target_3'utr
NSC 631305	rs701801	2.42E-05	M2	HPS1	0.049	Target_3'utr
NSC 634764	rs701801	0.000582751	M2	HPS1	0.001	Target_3'utr
NSC 641009	rs701801	0.000189502	M2	HPS1	0.041	Target_3'utr
NSC 652536	rs701801	0.002562752	M2	HPS1	0.007	Target_3'utr
NSC 655266	rs701801	0.00019902	M2	HPS1	0.026	Target_3'utr

Model : M1-Allele, M2-Recessive, M3-Additive, M4-Dominant
Total:4 Current:1 [First] [Prev] Next Last

Compound:

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Records:144

Gene	Compound	Gen_sig	Exp_pattern
HPS1	3-Deazaneplanocin, hydrochloride	0.042	Up
HPS1	4H-1-Benzothiopyran-4-one, 2-(methylsulfinyl)-	0.02	Down
HPS1	NSC 623925	0.028	Down
HPS1	cis-Dichlorobis(4-methoxyphenethylamine)platinum(II)	0.049	Down
HPS1	Naphtho[2,3-d]thiazole-4,9-dione, 2-[(4-nitrophenyl) amino]-	0.027	Down
HPS1	L-Lysine, N-[(methylamino)carbonyl]-N'-(phenylmethoxy- carbonyl)-, phenylmethyl ester	0.001	Down
HPS1	Cyclopentanone, 2-[(dimethylamino)methyl]-5-[(4-methoxy- phenyl)methylene]-, hydrochloride	0.007	Down
HPS1	Tellurium, trichloro[1,2-hexanedioato(2-)-O,O']-, ammonium	0.041	Up
HPS1	NSC 641594	0.016	Down
HPS1	Choline, hydroxide, 2-methoxy- 3-[methyl(octadecyl)amino]propyl hydrogen phosphate, inner salt	0.047	Up
HPS1	Pyrimidine, 2-[1,5-bis(4-chlorophenyl)-1H-1,2,3-triazol-4-yl]- 1,4,5,6-tetrahydro-	0.014	Down
HPS1	Cyclopentanone, 5-[(4-morpholinyl)methyl]-2-pentylidene-, hydrochloride	0.027	Down
HPS1	NSC 652536	0.007	Down
HPS1	NSC 655266	0.026	Down
HPS1	ANTINEOPLASTIC-655905	0.002	Down

Expression pattern: Sensitivity / Resistance
Total:10 Current:3 First Prev Next Last

SNP:

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Records:52

SNP	Gene	SNP_location	SNP_allele
rs146022441	HPS1	Chr10:100175995	G/T
rs115481722	HPS1	Chr10:100176040	G/A
rs111400787	HPS1	Chr10:100176104	A/-
rs3830025	HPS1	Chr10:100176104	A/G
rs113217845	HPS1	Chr10:100176105	G/A
rs3830024	HPS1	Chr10:100176106	G/A
rs1061437	HPS1	Chr10:100176154	C/T
rs60389574	HPS1	Chr10:100176210	C/T
rs181530013	HPS1	Chr10:100176216	G/A
rs186229582	HPS1	Chr10:100176316	T/C
rs190211350	HPS1	Chr10:100176320	C/A
rs1739	HPS1	Chr10:100176339	A/G
rs1737	HPS1	Chr10:100176366	T/C
rs114082441	HPS1	Chr10:100176405	C/T
rs182845978	HPS1	Chr10:100176416	G/A

Total:4 Current:1 [First] [Prev] Next Last

miRNA:

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Records:81

Gene	Gen_transcript	miRNA	miR_location
HPS1	ENST00000338546	hsa-mir-1	Chr18:19408976-19408997[-]
HPS1	ENST00000338546	hsa-mir-1	Chr20:61151558-61151579[+]
HPS1	ENST00000338546	hsa-mir-105-3p	ChrX:151560700-151560721[-]
HPS1	ENST00000338546	hsa-mir-105-3p	ChrX:151562893-151562914[-]
HPS1	ENST00000361490	hsa-mir-106b-3p	Chr7:99691625-99691646[-]
HPS1	ENST00000338546	hsa-mir-126-3p	Chr9:139565105-139565126[+]
HPS1	ENST00000338546	hsa-mir-135a-3p	Chr3:52328248-52328269[-]
HPS1	ENST00000361490	hsa-mir-141-3p	Chr12:7073318-7073339[+]
HPS1	ENST00000338546	hsa-mir-142-5p	Chr17:56408644-56408664[-]
HPS1	ENST00000361490	hsa-mir-151a-3p	Chr8:141742686-141742706[-]
HPS1	ENST00000361490	hsa-mir-193b-3p	Chr16:14397874-14397895[+]
HPS1	ENST00000338546	hsa-mir-206	Chr6:52009199-52009220[+]
HPS1	ENST00000338546	hsa-mir-212-5p	Chr17:1953622-1953644[-]
HPS1	ENST00000361490	hsa-mir-30c-1-3p	Chr1:41223011-41223032[+]
HPS1	ENST00000361490	hsa-mir-30c-2-3p	Chr6:72086667-72086688[-]

Total:6 Current:1 [First] [Prev] Next Last