Search_Gene

Query Gene
Gene name: Example: BCL2L11, ERCC1

Symbol:

VPS53

Description:

Location:

Chr17:411908-624957[-]

CRmiRSNP:

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Records:null

Compound	CRmiRSNP	SNP_sig	Model	Molecule	Mol_sig	Type

Model : M1-Allele, M2-Recessive, M3-Additive, M4-Dominant
Total:0 Current:1 [First] [Prev] [Next] [Last]

Compound:

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Records:98

Gene	Compound	Gen_sig	Exp_pattern
VPS53	NSC 688494	0.027	Up
VPS53	NSC 688500	0.041	Down
VPS53	Benzo[1,2-b:5,4-b']dithiophene-4,8-dione, 2,5-bis(1-hydroxyethyl)-	0.001	Down
VPS53	NSC 690605	0.013	Down
VPS53	NSC 693167	0.001	Down
VPS53	N-(4-Amino-4-deoxy-N10-methypteroyl)-L-homocysteic acid	0.017	Down
VPS53	(6R,6S)-2,4-Diamino-6-(3,4,5-trimethoxybenzyl)-5,6,7,8-tetrahydroquinazoline	0.041	Down
VPS53	NSC 697100	0.039	Down
VPS53	Kikubasaponin	0.028	Down
VPS53	NSC 699089	0.027	Down
VPS53	4H,9H-Naphtho[2,3-b]furan-2-carboxaldehyde, 4,9-dioxo-	0.032	Down
VPS53	NSC 704430	0.03	Up
VPS53	NSC 708446	0.005	Down
VPS53	NSC 709079	0.044	Down
VPS53	NSC 709909	0.038	Up

Expression pattern: Sensitivity / Resistance
Total:7 Current:4 First Prev Next Last

SNP:

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Records:316

SNP	Gene	SNP_location	SNP_allele
rs199746241	VPS53	Chr17:412340	CCTCACT/-
rs143385701	VPS53	Chr17:412346	T/C
rs146738736	VPS53	Chr17:412356	T/G
rs201995354	VPS53	Chr17:412387	T/C
rs78709351	VPS53	Chr17:412433	C/T
rs184679864	VPS53	Chr17:412439	C/T
rs200319731	VPS53	Chr17:412459	A/G
rs75659590	VPS53	Chr17:412467	G/C
rs201109438	VPS53	Chr17:412475	G/C
rs78648226	VPS53	Chr17:412520	C/T
rs201164240	VPS53	Chr17:412540	-/G
rs186979454	VPS53	Chr17:412544	C/T
rs76976372	VPS53	Chr17:412553	G/T
rs77559559	VPS53	Chr17:412554	T/C
rs77622030	VPS53	Chr17:412562	G/A

Total:22 Current:1 [First] [Prev] Next Last

miRNA:

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Records:38

Gene	Gen_transcript	miRNA	miR_location
VPS53	ENST00000268978	hsa-mir-106b-5p	Chr7:99691666-99691686[-]
VPS53	ENST00000268978	hsa-mir-10a-5p	Chr17:46657266-46657288[-]
VPS53	ENST00000268978	hsa-mir-122-5p	Chr18:56118320-56118341[+]
VPS53	ENST00000268978	hsa-mir-191-3p	Chr3:49058064-49058085[-]
VPS53	ENST00000268978	hsa-mir-218-5p	Chr4:20529922-20529942[+]
VPS53	ENST00000268978	hsa-mir-218-5p	Chr5:168195216-168195236[-]
VPS53	ENST00000268978	hsa-mir-22-5p	Chr17:1617246-1617267[-]
VPS53	ENST00000321906	hsa-mir-30b-3p	Chr8:135812775-135812796[-]
VPS53	ENST00000389040	hsa-mir-30b-3p	Chr8:135812775-135812796[-]
VPS53	ENST00000321906	hsa-mir-30c-1-3p	Chr1:41223011-41223032[+]
VPS53	ENST00000389040	hsa-mir-30c-1-3p	Chr1:41223011-41223032[+]
VPS53	ENST00000321906	hsa-mir-337-5p	Chr14:101340852-101340872[+]
VPS53	ENST00000389040	hsa-mir-337-5p	Chr14:101340852-101340872[+]
VPS53	ENST00000268978	hsa-mir-346	Chr10:88024504-88024526[-]
VPS53	ENST00000321906	hsa-mir-367-5p	Chr4:113569071-113569092[-]

Total:3 Current:1 [First] [Prev] Next Last